Johnson, W. O., et al. “Bayesian Estimation of the Receiver Operating Characteristic Curve for a Diagnostic Test With a Limit of Detection in the Absence of a Gold Standard”. Statistics in Medicine, vol. 29, no. 20, 2010, pp. 2090-06, https://doi.org/10.1002/sim.3975.

Genre

  • Journal Article
Contributors
Author: Johnson, W. O.
Author: Jafarzadeh, S. R.
Author: Gardner, I. A.
Author: Utts, J. M.
Date Issued
2010
Abstract

The receiver operating characteristic (ROC) curve is commonly used for evaluating the discriminatory ability of a biomarker. Measurements for a diagnostic test may be subject to an analytic limit of detection leading to immeasurable or unreportable test results. Ignoring the scores that are beyond the limit of detection of a test leads to a biased assessment of its discriminatory ability, as reflected by indices such as the associated area under the curve (AUC). We propose a Bayesian approach for the estimation of the ROC curve and its AUC for a test with a limit of detection in the absence of gold standard based on assumptions of normally and gamma-distributed data. The methods are evaluated in simulation studies, and a truncated gamma model with a point mass is used to evaluate quantitative real-time polymerase chain reaction data for bovine Johne's disease (paratuberculosis). Simulations indicated that estimates of diagnostic accuracy and AUC were good even for relatively small sample sizes (n=200). Exceptions were when there was a high per cent of unquantifiable results (60 per cent) or when AUC was ≤0.6, which indicated a marked overlap between the outcomes in infected and non-infected populations.

Note

Jafarzadeh, S. R.: Department of Medicine and Epidemiology, University of California, 1 Shields Avenue, Davis, CA 95616, USA.

Chichester; UK

John Wiley & Sons

Accession Number: 20103306801. Publication Type: Journal Article. Language: English. Number of References: 29 ref. Subject Subsets: Public Health; Veterinary Science; Veterinary Science

Language

  • English

Subjects

  • paratuberculosis
  • Bayesian theory
  • estimation
  • diagnostic value
  • diagnosis
  • statistical methods
  • Mycobacteriaceae
  • Mycobacterium
  • Corynebacterineae
  • biochemical markers
  • Prion, Viral, Bacterial and Fungal Pathogens of Animals (LL821) (New March 2000)
  • Evaluation
  • Diagnosis of Animal Diseases (LL886) (New March 2000)
  • Mycobacterium avium subsp. paratuberculosis
  • simulation models
  • bacterium
  • Mathematics and Statistics (ZZ100)
  • Mycobacterium avium
  • Actinobacteridae
  • Actinomycetales
  • diagnostic techniques
  • Actinobacteria
  • cattle diseases
  • biomarkers
  • Techniques and Methodology (ZZ900)
  • statistical analysis
  • Johne's disease
  • prokaryotes
  • bacteria
Page range
2090-2106
Host Title
Statistics in Medicine
Host Abbreviated Title
Stat.Med.
Volume
29
Issue
20
ISSN
0277-6715

Department