Genre
- Journal Article
The receiver operating characteristic (ROC) curve is commonly used for evaluating the discriminatory ability of a biomarker. Measurements for a diagnostic test may be subject to an analytic limit of detection leading to immeasurable or unreportable test results. Ignoring the scores that are beyond the limit of detection of a test leads to a biased assessment of its discriminatory ability, as reflected by indices such as the associated area under the curve (AUC). We propose a Bayesian approach for the estimation of the ROC curve and its AUC for a test with a limit of detection in the absence of gold standard based on assumptions of normally and gamma-distributed data. The methods are evaluated in simulation studies, and a truncated gamma model with a point mass is used to evaluate quantitative real-time polymerase chain reaction data for bovine Johne's disease (paratuberculosis). Simulations indicated that estimates of diagnostic accuracy and AUC were good even for relatively small sample sizes (n=200). Exceptions were when there was a high per cent of unquantifiable results (60 per cent) or when AUC was ≤0.6, which indicated a marked overlap between the outcomes in infected and non-infected populations.
Jafarzadeh, S. R.: Department of Medicine and Epidemiology, University of California, 1 Shields Avenue, Davis, CA 95616, USA.
Chichester; UK
John Wiley & Sons
Accession Number: 20103306801. Publication Type: Journal Article. Language: English. Number of References: 29 ref. Subject Subsets: Public Health; Veterinary Science; Veterinary Science
Language
- English
Subjects
- paratuberculosis
- Bayesian theory
- estimation
- diagnostic value
- diagnosis
- statistical methods
- Mycobacteriaceae
- Mycobacterium
- Corynebacterineae
- biochemical markers
- Prion, Viral, Bacterial and Fungal Pathogens of Animals (LL821) (New March 2000)
- Evaluation
- Diagnosis of Animal Diseases (LL886) (New March 2000)
- Mycobacterium avium subsp. paratuberculosis
- simulation models
- bacterium
- Mathematics and Statistics (ZZ100)
- Mycobacterium avium
- Actinobacteridae
- Actinomycetales
- diagnostic techniques
- Actinobacteria
- cattle diseases
- biomarkers
- Techniques and Methodology (ZZ900)
- statistical analysis
- Johne's disease
- prokaryotes
- bacteria